George Sterbinsky | 1 Jul 21:29 2016

Athena crash on mac on import

Hello,

Athena crashes upon import of the attached project file. I am using the latest release of Athena for mac (0.9.22) on OSX 10.10.5. I am able to open the file on windows. The message that is printed to the terminal when Athena crashes is pasted below. Please let me know if any further information would be helpful.

Thank you,
George


[!!!] bkg_funnorm is not an attribute to set for Demeter::Data=HASH(0x7fe2e57967c8) at /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level/MooseX/SetGet.pm line 9.
    MooseX::SetGet::set(Demeter::Data=HASH(0x7fe2e57967c8), "bkg_spl2e", 110.195726042215, "y_offset", 0, "bft_rwindow", "hanning", "fft_kwindow", "hanning", ...) called at /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level/Demeter/Data/Prj.pm line 411
    Demeter::Data::Prj::_record(Demeter::Data::Prj=HASH(0x7fe2e5785c70), 5, "psmtj") called at /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level/Demeter/Data/Prj.pm line 197
    Demeter::Data::Prj::record(Demeter::Data::Prj=HASH(0x7fe2e5785c70), 1) called at /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level/Demeter/UI/Athena/IO.pm line 802
    Demeter::UI::Athena::IO::_prj(Demeter::UI::Athena=HASH(0x7fe2dc0226a8), "/Users...sta"..., "/Users...sta"..., 1, "") called at /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level/Demeter/UI/Athena/IO.pm line 164
    Demeter::UI::Athena::IO::Import(Demeter::UI::Athena=HASH(0x7fe2dc0226a8)) called at /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level/Demeter/UI/Athena.pm line 859
    Demeter::UI::Athena::OnMenuClick(Wx::Frame=HASH(0x7fe2e28ff570), Wx::CommandEvent=SCALAR(0x7fe2e5781840), Demeter::UI::Athena=HASH(0x7fe2dc0226a8)) called at /opt/local/lib/perl5/site_perl/5.22/darwin-thread-multi-2level/Demeter/UI/Athena.pm line 782
    Demeter::UI::Athena::__ANON__(Wx::Frame=HASH(0x7fe2e28ff570), Wx::CommandEvent=SCALAR(0x7fe2e5781840)) called at /opt/local/bin/athena line 44
    eval {...} called at /opt/local/bin/athena line 44
Attachment (standard.prj): application/octet-stream, 51 KiB
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Isabelle Kieffer | 1 Jul 17:24 2016
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How to change the data file in Dartemis?

Dear all,

I am using artemis from Demeter and I am unable to "change the current 
data file (that is, to apply this fitting model to a different data 
set)" as it was possible with the "open file" function of the old 
artemis. This function openned a popup window asking to choose between 
"read a new data file" or "change the current data file".

If I use the "open project or data" function of Dartemis (or the "Add" 
button of the "Data sets" frame), it opens the data set in a new window. 
Then, I am unable to use the paths and parameters used for the previous 
fit. Any attemp to export, transfer or drag/drop paths or parameters has 
either no effect or crashes the program.

If I use the "Replace this chi(k)" function, it automatically chooses to 
"read a new data file (that is, to do multiple data set fitting)" 
without opening any popup window asking my choice.

I suppose I did not find the good way to apply my fitting model to a new 
data set.
Thank you for advice.

Isabelle

--

-- 
Isabelle KIEFFER, Ingénieur de Recherche CNRS, Ligne CRG FAME (BM30B)
ESRF - The European Synchrotron
CS 40220 - 38043 Grenoble Cedex 9 - France
Tel : +33 (0)4 76 88 25 47 - Bureau : LOB 2-50

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Ditty Dixon | 24 Jun 07:19 2016
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Re: Ifeffit Digest, Vol 160, Issue 17

Hello Fuxiang,

A small suggestion

Please also don't forget to try multiple edge data fitting if you already measured your data in both Fe and Ni edge, this may actually reduce the number of parameters to use. You need just on parameter  Fe-Ni/Ni-Fe should be same when looking from both atom

Hope it helps,

Ditty

On Jun 23, 2016 23:48, <ifeffit-request-yJARRRr6MatTopXEvdbuMnQixyClZ8lk@public.gmane.organl.gov> wrote:
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Today's Topics:

   1. Re: How to input atoms in solid solution for Artemis
      (Scott Calvin)
   2. Re: How to input atoms in solid solution for Artemis
      (Fuxiang Zhang)


----------------------------------------------------------------------

Message: 1
Date: Thu, 23 Jun 2016 16:23:36 -0400
From: Scott Calvin <dr.scott.calvin-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org>
To: XAFS Analysis using Ifeffit <ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
Subject: Re: [Ifeffit] How to input atoms in solid solution for
        Artemis
Message-ID: <F8C55BBE-4E8E-436E-97C4-35387D9B5B02-cB+Rp0A3BU2HXe+LvDLADg@public.gmane.org>
Content-Type: text/plain; charset="utf-8"

One additional thought:

Distinguishing Ni-Ni and Ni-Fe by creating two different feff paths and fitting the spectrum as a mixture of the two is very difficult, to put it mildly, as both Anatoly and Matt indicated.

But the bond length determined by your fit may be able to give you a clue, particularly when compared to appropriate standards. Depending on the details of your structure, the average bond length may depend on the fraction of sites occupied by iron to a degree which is measurable by EXAFS. Even if you simply use a nickel-nickel scattering path in feff to model your structure, differences in bond length could be indicative of changes in site occupancy.

Ideally, this could be done by creating a series of standards with known iron-nickel ratios, fitting the bond length for each, and then comparing a fit of a sample with a similar structure but unknown iron-nickel ratio to the results for the standards.

?Scott Calvin
Sarah Lawrence College

> On Jun 23, 2016, at 3:41 PM, Fuxiang Zhang <zhangfx-63aXycvo3TyHXe+LvDLADg@public.gmane.org> wrote:
>
> Hi, Matt and Anayoly,
> Thank you very much for the help.
>
> Fuxiang
>
> On Thu, Jun 23, 2016 at 1:51 PM, Anatoly I Frenkel <afrenke2-OKzqDoqOkpk@public.gmane.org <mailto:afrenke2-OKzqDoqOkpk@public.gmane.org>> wrote:
> Whatever you decide to do, remember that Ni Ni and Ni Fe pairs look very similar by EXAFS, so it does not matter how you end up doing it.
> You can as well use pure Ni but you may want to consider both fcc and bcc structure for making the model because the alloy may end up to be either that or that, especially if it is a nanoalloy.
>
> Anayoly
>
>
>
> Sent from my Verizon Wireless 4G LTE Tablet
>
>
> -------- Original message --------
> From: Fuxiang Zhang <zhangfx <at> umich.edu <mailto:zhangfx <at> umich.edu>>
> Date: 6/23/2016 12:51 PM (GMT-05:00)
> To: ifeffit <at> millenia.cars.aps.anl.gov <mailto:ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
> Subject: [Ifeffit] How to input atoms in solid solution for Artemis
>
> Hi, All,
> I am new in using EXAFS techniques. Just wondering how to input atomic structure of NiFe solid solution to Artemis. It has a simple Ni-structure, but both Ni and Fe occupy the same site. If I use partial occupancy, Artemis program does not allow. Anyone can give me an ideal?
> Also the coordination number N cannot be refined in this simple system (12), is that right? In fact I just want to get the N through the fitting of EXAFS because of the partial occupancy.
> Thank you very much
>
> Fuxiang Zhang
>
> _______________________________________________
> Ifeffit mailing list
> Ifeffit <at> millenia.cars.aps.anl.gov <mailto:Ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
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>
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Message: 2
Date: Thu, 23 Jun 2016 17:47:00 -0400
From: Fuxiang Zhang <zhangfx <at> umich.edu>
To: XAFS Analysis using Ifeffit <ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
Subject: Re: [Ifeffit] How to input atoms in solid solution for
        Artemis
Message-ID:
        <CAP=koc6bTHKqDGk30bqQPH+56apQ8Jn5g0gCxhMRJbqhMhc38A-JsoAwUIsXosN+BqQ9rBEUg@public.gmane.org>
Content-Type: text/plain; charset="utf-8"

Hi, Scott,

In fact, I have a series of single crystal Ni-Fe alloys (Fm-3m) with known
atomic ratio, and measured both Fe and Ni edges for samples and standards.
I just want to see if there's any difference between the local bonding
environment of Fe and Ni, such as R, N and sigma2. Now using the suggested
method by Matt by changing atoms in FEFF.inp file, I can only get ss, deltr
and E0 from fitting (I don't know how to refine N and R). But the fitting
with Ni (or Fe) edge can only generate the same R and deltr for Ni-Ni and
Ni-Fe pairs. Fitting the edges of Ni and Fe will yield a little difference
in the R and deltr. Which results should I believe, or something wrong I am
using the program because I cannot generate different R for Ni-Ni and Ni-Fe
pairs with the same data set.
Many thanks for your suggestions and helps.

Fuxiang Zhang

On Thu, Jun 23, 2016 at 4:23 PM, Scott Calvin <dr.scott.calvin-Re5JQEeQqe8AvxtiuMwx3w@public.gmane.org>
wrote:

> One additional thought:
>
> Distinguishing Ni-Ni and Ni-Fe by creating two different feff paths and
> fitting the spectrum as a mixture of the two is very difficult, to put it
> mildly, as both Anatoly and Matt indicated.
>
> But the bond length determined by your fit *may* be able to give you a
> clue, particularly when compared to appropriate standards. Depending on the
> details of your structure, the average bond length may depend on the
> fraction of sites occupied by iron to a degree which is measurable by
> EXAFS. Even if you simply use a nickel-nickel scattering path in feff to
> model your structure, differences in bond length could be indicative of
> changes in site occupancy.
>
> Ideally, this could be done by creating a series of standards with known
> iron-nickel ratios, fitting the bond length for each, and then comparing a
> fit of a sample with a similar structure but unknown iron-nickel ratio to
> the results for the standards.
>
> ?Scott Calvin
> Sarah Lawrence College
>
> On Jun 23, 2016, at 3:41 PM, Fuxiang Zhang <zhangfx-63aXycvo3TyHXe+LvDLADg@public.gmane.org> wrote:
>
> Hi, Matt and Anayoly,
> Thank you very much for the help.
>
> Fuxiang
>
> On Thu, Jun 23, 2016 at 1:51 PM, Anatoly I Frenkel <afrenke2-OKzqDoqOkpk@public.gmane.org>
> wrote:
>
>> Whatever you decide to do, remember that Ni Ni and Ni Fe pairs look very
>> similar by EXAFS, so it does not matter how you end up doing it.
>> You can as well use pure Ni but you may want to consider both fcc and bcc
>> structure for making the model because the alloy may end up to be either
>> that or that, especially if it is a nanoalloy.
>>
>> Anayoly
>>
>>
>>
>> Sent from my Verizon Wireless 4G LTE Tablet
>>
>>
>> -------- Original message --------
>> From: Fuxiang Zhang <zhangfx-63aXycvo3TyHXe+LvDLADg@public.gmane.org>
>> Date: 6/23/2016 12:51 PM (GMT-05:00)
>> To: ifeffit <at> millenia.cars.aps.anl.gov
>> Subject: [Ifeffit] How to input atoms in solid solution for Artemis
>>
>> Hi, All,
>> I am new in using EXAFS techniques. Just wondering how to input atomic
>> structure of NiFe solid solution to Artemis. It has a simple Ni-structure,
>> but both Ni and Fe occupy the same site. If I use partial occupancy,
>> Artemis program does not allow. Anyone can give me an ideal?
>> Also the coordination number N cannot be refined in this simple system
>> (12), is that right? In fact I just want to get the N through the fitting
>> of EXAFS because of the partial occupancy.
>> Thank you very much
>>
>> Fuxiang Zhang
>>
>> _______________________________________________
>> Ifeffit mailing list
>> Ifeffit <at> millenia.cars.aps.anl.gov
>> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
>> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
>>
>>
> _______________________________________________
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> Ifeffit <at> millenia.cars.aps.anl.gov
> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit
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>
>
> _______________________________________________
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------------------------------

End of Ifeffit Digest, Vol 160, Issue 17
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Fuxiang Zhang | 23 Jun 18:38 2016
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How to input atoms in solid solution for Artemis

Hi, All,
I am new in using EXAFS techniques. Just wondering how to input atomic structure of NiFe solid solution to Artemis. It has a simple Ni-structure, but both Ni and Fe occupy the same site. If I use partial occupancy, Artemis program does not allow. Anyone can give me an ideal?
Also the coordination number N cannot be refined in this simple system (12), is that right? In fact I just want to get the N through the fitting of EXAFS because of the partial occupancy.
Thank you very much

Fuxiang Zhang 
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储胜启 | 23 Jun 04:09 2016
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report bugs

Hi, deal bruce,

I have found a bug. When I click the button ‘Run Atoms’ in Artemis program, it will crash suddenly. I have
tried this in different OS, Windows XP and Win7, and got the same error. The log file said as follows:

Demeter version 0.9.24

Can't call method "workspace" on an undefined value at
C:/MyProgramm/DemeterPerl/perl/site/lib/Demeter/UI/Atoms/Xtal.pm line 1004.

Best wishes,

-Shengqi Chu

Beijing Synchrotron Radiation Facility, Beijing 100049,China

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Maureen Le Bars | 22 Jun 16:05 2016
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Use of restraint

Hello,

I have a couple of questions about data analysis on artemis

I used a restraint for my fits. I've read some documentation about it and found Matt Newville's talk (https://pubweb.bnl.gov/~frenkel/BNLworkshop2001/newville.pdf). It is reported that a restraint adds a "V" term to the chi-square (slides number 16 and 17).

According to this formula, what is the number that artemis gives for the "restrain" parameter at the end of the fit? How should we consider this number in the evaluation of the fit ?

I also don't really know very much about the scaling factor to apply in the formula : scale*penalty(X,a,b). I've read that the square root of chi-square seems to be a good size from some of Bruce Ravel's answers in ifeffit mailing list. How does the scaling factor control the restraint ? What is its relationship with the chi-square ?

Thank you in advance for your help,

Maureen

PhD student at CIRAD - ADEME
CEREGE - Europôle de l'Arbois
BP 80
13545 Aix en Provence Cedex 4
France
+33 4 42 97 15 48

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Chloe Yi-Yi Wu | 17 Jun 22:04 2016

Athena crash on Mac when exporting empirical standard

Hi all,

I'd like to export an empirical standard from Athena to fit EXAFS with Artemis. However, once I clicked on the element for scattering in the pop-up window, Athena was frozen and no .es file was generated. Does anyone know how to fix the problem?

Thanks,
Chloe

--
Yi-Yi (Chloe) Wu
Kung Research Group
Dept. of Chemical and Biological Engineering
Northwestern University
Evanston, IL USA
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mazhar iqbal | 17 Jun 03:18 2016
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NiO-test-athena-project

Hello

I would appreciate valuable comments on the NiO spectrum processed in athena. I am a new in this area so please comment on any mistake I have made while processing.

Best Regards
Attachment (athena_NiO.prj): application/octet-stream, 6444 bytes
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Mirko | 9 Jun 16:32 2016
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Question about fuzzy degeneracy

Hey,

I am quite new to EXAFS and therefore very glad about this mailing list, it helps a lot.

My question is about the fuzzy degeneracy mentioned in the paper "Path degeneracy and EXAFS analysis of disordered materials" (Ravel, B. J Synchrotron Radiat. 2014 Nov;21(Pt 6):1269-74.)

I investigate disordered systems like aqueous salt solutions and would like to use the method on my FEFF calculation. However, I obtained my structure for the FEFF calculation from a MD-Simulation and would like to average over several hundreds of FEFF calculations. To handle this amount of data I use LARCH, which doesn’t have the feature to degenerate similar paths to one. I would like to use the method by myself to degenerate the first coordination shell of my oxygen atoms around the salt.

How do you merge the FEFF parameters from each scattering paths after they are grouped together in a bin with the extended pathfinder algorithm (I think, you can’t just make an average of for example the phase shift or the mean free path … right?)

Best regards and thanks a lot!

Mirko

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Gnu script | 9 Jun 16:25 2016
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Sorbed complex in Atoms

Dear All,

I am relatively new to Ifeffit and Artemis. I am trying to find a way to create four-shell model of an outer-sphere complex in Atoms or some other way readable by Atoms. I have no idea about the geometry, space group but some rough guess of bond-distances. The model to test against the EXAFS data is:
Ni is the central atom
Ni-O first shell
Ni-Ni second shell
Ni-Ti third shell
Ni-Si fourth shell

The model aims to test the adsorption of Ni on the surface of Ti-containing silicate mineral.

Could you please help.

Thanks.

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Dien.Li | 6 Jun 21:52 2016

Re: Artemis file opening

Hi, Bob and Bruce

With upgrading the Demeter 9;24, I am able to open files from 9.21. Thanks you all.

Dien Li, Ph.D.
Environmental Sciences and Biotechnology
Savannah River National Laboratory
Aiken, South Carolina, 29808
Tel: 803-725-7520




From:        ifeffit-request-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
To:        ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
Date:        06/06/2016 03:01 PM
Subject:        Ifeffit Digest, Vol 160, Issue 8
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Today's Topics:

  1. Re: Ifeffit Digest, Vol 160, Issue 7 (Dien.Li-/3/1maphar8@public.gmane.org)
  2. Re: Ifeffit Digest, Vol 160, Issue 7 (Farquhar, Erik)


----------------------------------------------------------------------

Message: 1
Date: Mon, 6 Jun 2016 13:50:42 -0400
From: Dien.Li-/3/1maphar8@public.gmane.org
To: ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
Subject: Re: [Ifeffit] Ifeffit Digest, Vol 160, Issue 7
Message-ID:
                <OF0754ACB2.B29F1774-ON85257FCA.00619402-85257FCA.006206D8-/3/1maphar8@public.gmane.org>
Content-Type: text/plain; charset="us-ascii"

Hi, Bob and Bruce

Thank for your quick response. No, I have not upgrade to 9.24 yet, because
if one version Artemis is not able to open another version files, I am
worried about that I can not open my all other current files, maybe the
newer version is able to open the older version files. By the way, when I
clicked the Artemis fitting file from my collaborator, after I saw Artemis
picture logo, and several Artemis window flashed, and then gone, so that I
failed to open. Thanks for any instruction.

Dien Li, Ph.D.
Environmental Sciences and Biotechnology
Savannah River National Laboratory
Aiken, South Carolina, 29808
Tel: 803-725-7520




From:   ifeffit-request-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
To:     ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
Date:   06/06/2016 01:06 PM
Subject:        Ifeffit Digest, Vol 160, Issue 7
Sent by:        "Ifeffit" <ifeffit-bounces-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>



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Today's Topics:

  1. Questions (Dien.Li-/3/1maphar8@public.gmane.org)
  2. Re: Questions (Robert Gordon)
  3. Re: Questions (Bruce Ravel)


----------------------------------------------------------------------

Message: 1
Date: Mon, 6 Jun 2016 11:50:05 -0400
From: Dien.Li-/3/1maphar8@public.gmane.org
To: ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
Subject: [Ifeffit] Questions
Message-ID:
<OF4DB5BE28.5E4C9E2D-ON85257FCA.0056CE0F-85257FCA.0056FBB2-/3/1maphar8@public.gmane.org>
Content-Type: text/plain; charset="us-ascii"

Hi, All

I am using Demeter Artemis version 9.18, however, I could not open the
Artemis file that was generated from Artemis Version 9.21 from my
collaborator, anyone can instruct or help? Thanks.

Dien Li, Ph.D.
Environmental Sciences and Biotechnology
Savannah River National Laboratory
Aiken, South Carolina, 29808
Tel: 803-725-7520
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Message: 2
Date: Mon, 6 Jun 2016 08:53:25 -0700
From: Robert Gordon <ragordon-n2G8xh6EFeol6PmfSQfVew@public.gmane.org>
To: ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
Subject: Re: [Ifeffit] Questions
Message-ID: <e6efcd2f-d03e-ff1c-3858-5d0bbf444822-n2G8xh6EFeol6PmfSQfVew@public.gmane.org>
Content-Type: text/plain; charset="windows-1252"; Format="flowed"

Has it occurred to you to upgrade your version (and your colleague too)?
Current version is 0.9.24.

-R.

On 6/6/2016 8:50 AM, Dien.Li-/3/1maphar8@public.gmane.org wrote:
> Hi, All
>
> I am using Demeter Artemis version 9.18, however, I could not open the
> Artemis file that was generated from Artemis Version 9.21 from my
> collaborator, anyone can instruct or help? Thanks.
>
> Dien Li, Ph.D.
> Environmental Sciences and Biotechnology
> Savannah River National Laboratory
> Aiken, South Carolina, 29808
> Tel: 803-725-7520
>
>
> _______________________________________________
> Ifeffit mailing list
> Ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit

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------------------------------

Message: 3
Date: Mon, 6 Jun 2016 12:58:21 -0400
From: Bruce Ravel <bravel-IGkKxAqZmp0@public.gmane.org>
To: XAFS Analysis using Ifeffit <ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
Subject: Re: [Ifeffit] Questions
Message-ID: <5755ABAD.8020308-IGkKxAqZmp0@public.gmane.org>
Content-Type: text/plain; charset=windows-1252; format=flowed

On 06/06/2016 11:50 AM, Dien.Li-/3/1maphar8@public.gmane.org wrote:
> I am using Demeter Artemis version 9.18, however, I could not open the
> Artemis file that was generated from Artemis Version 9.21 from my
> collaborator, anyone can instruct or help? Thanks.

Since you did not provide any actual ... y'know ... information about
the problem, there is nothing I can possibly do to help.

http://bruceravel.github.io/demeter/documents/SinglePage/bugs.html

Robert's advice seems pretty good to me.

B

--
 Bruce Ravel  ------------------------------------ bravel-IGkKxAqZmp0@public.gmane.org

 National Institute of Standards and Technology
 Synchrotron Science Group at NSLS-II
 Building 535A
 Upton NY, 11973

 Homepage:    http://bruceravel.github.io/home/
 Software:    https://github.com/bruceravel
 Demeter:     http://bruceravel.github.io/demeter/


------------------------------

Subject: Digest Footer

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Message: 2
Date: Mon, 6 Jun 2016 18:53:28 +0000
From: "Farquhar, Erik" <efarquhar-IGkKxAqZmp0@public.gmane.org>
To: XAFS Analysis using Ifeffit <ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
Subject: Re: [Ifeffit] Ifeffit Digest, Vol 160, Issue 7
Message-ID:
                <7FDEA66384A4E54DA377F301E816600C46904E84-XlQeyZWOaTvvfsTlZ+gd+A@public.gmane.org>
Content-Type: text/plain; charset="us-ascii"

In my experience newer versions of Athena/Artemis are always able to open files from the older 0.9.xx versions, so you should have no issues upgrading to v. 0.9.24. This has been reported several times previously on the list, but as far as I know there's been no reports of a newer version unable to open an older file.

Erik

From: Ifeffit [mailto:ifeffit-bounces-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org] On Behalf Of Dien.Li-/3/1maphar8@public.gmane.org
Sent: Monday, June 6, 2016 1:51 PM
To: ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org
Subject: Re: [Ifeffit] Ifeffit Digest, Vol 160, Issue 7

Hi, Bob and Bruce

Thank for your quick response. No, I have not upgrade to 9.24 yet, because if one version Artemis is not able to open another version files, I am worried about that I can not open my all other current files, maybe the newer version is able to open the older version files. By the way, when I clicked the Artemis fitting file from my collaborator, after I saw Artemis picture logo, and several Artemis window flashed, and then gone, so that I failed to open. Thanks for any instruction.

Dien Li, Ph.D.
Environmental Sciences and Biotechnology
Savannah River National Laboratory
Aiken, South Carolina, 29808
Tel: 803-725-7520




From:        ifeffit-request-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org<mailto:ifeffit-request-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
To:        ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org<mailto:ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
Date:        06/06/2016 01:06 PM
Subject:        Ifeffit Digest, Vol 160, Issue 7
Sent by:        "Ifeffit" <ifeffit-bounces-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org<mailto:ifeffit-bounces-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>>
________________________________



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When replying, please edit your Subject line so it is more specific
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Today's Topics:

 1. Questions (Dien.Li-/3/1maphar8@public.gmane.org<mailto:Dien.Li-/3/1maphar8@public.gmane.org>)
 2. Re: Questions (Robert Gordon)
 3. Re: Questions (Bruce Ravel)


----------------------------------------------------------------------

Message: 1
Date: Mon, 6 Jun 2016 11:50:05 -0400
From: Dien.Li-/3/1maphar8@public.gmane.org<mailto:Dien.Li-/3/1maphar8@public.gmane.org>
To: ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org<mailto:ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
Subject: [Ifeffit] Questions
Message-ID:
               <OF4DB5BE28.5E4C9E2D-ON85257FCA.0056CE0F-85257FCA.0056FBB2-/3/1maphar8@public.gmane.org<mailto:OF4DB5BE28.5E4C9E2D-ON85257FCA.0056CE0F-85257FCA.0056FBB2-/3/1maphar8@public.gmane.org>>
Content-Type: text/plain; charset="us-ascii"

Hi, All

I am using Demeter Artemis version 9.18, however, I could not open the
Artemis file that was generated from Artemis Version 9.21 from my
collaborator, anyone can instruct or help? Thanks.

Dien Li, Ph.D.
Environmental Sciences and Biotechnology
Savannah River National Laboratory
Aiken, South Carolina, 29808
Tel: 803-725-7520
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------------------------------

Message: 2
Date: Mon, 6 Jun 2016 08:53:25 -0700
From: Robert Gordon <ragordon-n2G8xh6EFeol6PmfSQfVew@public.gmane.org<mailto:ragordon-n2G8xh6EFeol6PmfSQfVew@public.gmane.org>>
To: ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org<mailto:ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
Subject: Re: [Ifeffit] Questions
Message-ID: <e6efcd2f-d03e-ff1c-3858-5d0bbf444822-n2G8xh6EFeol6PmfSQfVew@public.gmane.org<mailto:e6efcd2f-d03e-ff1c-3858-5d0bbf444822-n2G8xh6EFeol6PmfSQfVew@public.gmane.org>>
Content-Type: text/plain; charset="windows-1252"; Format="flowed"

Has it occurred to you to upgrade your version (and your colleague too)?
Current version is 0.9.24.

-R.

On 6/6/2016 8:50 AM, Dien.Li-/3/1maphar8@public.gmane.org<mailto:Dien.Li-/3/1maphar8@public.gmane.org> wrote:
> Hi, All
>
> I am using Demeter Artemis version 9.18, however, I could not open the
> Artemis file that was generated from Artemis Version 9.21 from my
> collaborator, anyone can instruct or help? Thanks.
>
> Dien Li, Ph.D.
> Environmental Sciences and Biotechnology
> Savannah River National Laboratory
> Aiken, South Carolina, 29808
> Tel: 803-725-7520
>
>
> _______________________________________________
> Ifeffit mailing list
> Ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org<mailto:Ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>
> http://millenia.cars.aps.anl.gov/mailman/listinfo/ifeffit
> Unsubscribe: http://millenia.cars.aps.anl.gov/mailman/options/ifeffit

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Message: 3
Date: Mon, 6 Jun 2016 12:58:21 -0400
From: Bruce Ravel <bravel-IGkKxAqZmp0@public.gmane.org<mailto:bravel-IGkKxAqZmp0@public.gmane.org>>
To: XAFS Analysis using Ifeffit <ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org<mailto:ifeffit-yJARRRr6MatTopXEvdbuMochTzHAynqa8htcxDm17Xw@public.gmane.org>>
Subject: Re: [Ifeffit] Questions
Message-ID: <5755ABAD.8020308-IGkKxAqZmp0@public.gmane.org<mailto:5755ABAD.8020308-IGkKxAqZmp0@public.gmane.org>>
Content-Type: text/plain; charset=windows-1252; format=flowed

On 06/06/2016 11:50 AM, Dien.Li-/3/1maphar8@public.gmane.org<mailto:Dien.Li-/3/1maphar8@public.gmane.org> wrote:
> I am using Demeter Artemis version 9.18, however, I could not open the
> Artemis file that was generated from Artemis Version 9.21 from my
> collaborator, anyone can instruct or help? Thanks.

Since you did not provide any actual ... y'know ... information about
the problem, there is nothing I can possibly do to help.

http://bruceravel.github.io/demeter/documents/SinglePage/bugs.html

Robert's advice seems pretty good to me.

B

--
Bruce Ravel  ------------------------------------ bravel-IGkKxAqZmp0@public.gmane.org<mailto:bravel-IGkKxAqZmp0@public.gmane.org>

National Institute of Standards and Technology
Synchrotron Science Group at NSLS-II
Building 535A
Upton NY, 11973

Homepage:    http://bruceravel.github.io/home/
Software:    https://github.com/bruceravel
Demeter:     http://bruceravel.github.io/demeter/


------------------------------

Subject: Digest Footer

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