WormBase | 5 Dec 2004 20:28
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WormBase release WS135 now online

This is an automatic announcement that WormBase
(http://www.wormbase.org) has just been updated.  New releases occur
roughly every 2 weeks.

The text of the AceDB release notes, which contains highlights of the
new data is attached.  You can download the full AceDB files from:

   ftp://ftp.sanger.ac.uk/pub/wormbase/current_release/

New release of WormBase WS135, Wormpep135 and Wormrna135 Thu Nov 11 13:32:31 GMT 2004

WS135 was built by Paul Davis
======================================================================

This directory includes:
i)	database.WS135.*.tar.gz    -   compressed data for new release
ii)	models.wrm.WS135           -   the latest database schema (also in above database files)
iii)	CHROMOSOMES/subdir         -   contains 3 files (DNA, GFF & AGP per chromosome)
iv)	WS135-WS134.dbcomp         -   log file reporting difference from last release
v)	wormpep135.tar.gz          -   full Wormpep distribution corresponding to WS135
vi)	wormrna135.tar.gz          -   latest WormRNA release containing non-coding RNA's in the genome
vii)	confirmed_genes.WS135.gz   -   DNA sequences of all genes confirmed by EST &/or cDNA
viii)	cDNA2orf.WS135.gz            -   Latest set of ORF connections to each cDNA (EST, OST, mRNA)
ix)	gene_interpolated_map_positions.WS135.gz    - Interpolated map positions for each coding/RNA gene
x)	clone_interpolated_map_positions.WS135.gz   - Interpolated map positions for each clone
xi)	best_blastp_hits.WS135.gz  - for each C. elegans WormPep protein, lists Best blastp match to
                            human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
xii)	best_blastp_hits_brigprot.WS135.gz   - for each C. briggsae protein, lists Best blastp match to
                                     human, fly, yeast, C. elegans, and SwissProt & TrEMBL proteins.
xiii)	geneIDs.WS135.gz   - list of all current gene identifiers with CGC & molecular names (when known)
(Continue reading)

WormBase | 24 Dec 2004 16:18
Favicon

WormBase release WS136 now online

This is an automatic announcement that WormBase
(http://www.wormbase.org) has just been updated.  New releases occur
roughly every 2 weeks.

The text of the AceDB release notes, which contains highlights of the
new data is attached.  You can download the full AceDB files from:

   ftp://ftp.sanger.ac.uk/pub/wormbase/current_release/

New release of WormBase WS136, Wormpep136 and Wormrna136 Fri Dec  3 16:07:46 GMT 2004

WS136 was built by Anthony
======================================================================

This directory includes:
i)	database.WS136.*.tar.gz    -   compressed data for new release
ii)	models.wrm.WS136           -   the latest database schema (also in above database files)
iii)	CHROMOSOMES/subdir         -   contains 3 files (DNA, GFF & AGP per chromosome)
iv)	WS136-WS135.dbcomp         -   log file reporting difference from last release
v)	wormpep136.tar.gz          -   full Wormpep distribution corresponding to WS136
vi)	wormrna136.tar.gz          -   latest WormRNA release containing non-coding RNA's in the genome
vii)	confirmed_genes.WS136.gz   -   DNA sequences of all genes confirmed by EST &/or cDNA
viii)	cDNA2orf.WS136.gz            -   Latest set of ORF connections to each cDNA (EST, OST, mRNA)
ix)	gene_interpolated_map_positions.WS136.gz    - Interpolated map positions for each coding/RNA gene
x)	clone_interpolated_map_positions.WS136.gz   - Interpolated map positions for each clone
xi)	best_blastp_hits.WS136.gz  - for each C. elegans WormPep protein, lists Best blastp match to
                            human, fly, yeast, C. briggsae, and SwissProt & TrEMBL proteins.
xii)	best_blastp_hits_brigprot.WS136.gz   - for each C. briggsae protein, lists Best blastp match to
                                     human, fly, yeast, C. elegans, and SwissProt & TrEMBL proteins.
xiii)	geneIDs.WS136.gz   - list of all current gene identifiers with CGC & molecular names (when known)
(Continue reading)


Gmane