euler | 30 Mar 09:21 2015
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Generate publicly accessible thumbnails of restricted content

Dear All,

I wonder if any of you have tried generating publicly accessible thumbnails
of restricted content? I enabled the filter for ImageMagick and removed the
JPEG Thumbnail from the plugin list.

#Names of the enabled MediaFilter or FormatFilter plugins
filter.plugins = PDF Text Extractor, HTML Text Extractor, \
                 PowerPoint Text Extractor, \
                 Word Text Extractor, ImageMagick Image Thumbnail,
ImageMagick PDF Thumbnail

#Publicly accessible thumbnails of restricted content.
#List the MediaFilter name's that would get publicly accessible permissions
#Any media filters not listed will instead inherit the permissions of the
parent bitstream
filter.org.dspace.app.mediafilter.publicPermission = JPEGFilter,
XPDF2Thumbnail, ImageMagick PDF Thumbnail

But when I run dspace filter-media -i 10862/2158 -p "ImageMagick PDF
Thumbnail" -v -f, the thumbnail remained restricted. I'm excited to
implement this because this would mean that I don't have to change the
permissions of individual generated thumbnails of restricted content. Any
advice would be appreciated.

Thanks in advance,
euler

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Vinay Kumar Sharma | 29 Mar 13:52 2015
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Biblio-Transformation-Engine

Dear Friends,

I want to configure Biblio-Transformation-Engine in Dspace.

Can anyone please guide me how can i configure it so that using Pubmed ID or DOI I can direclyt import the metadata into Dspace?


thanks & regards
Vinay Kumar Sharma
Librarian
Sarath Engineering and Technology
N.H. - 08, Nr. Chiloda
Himatnagar-383125
Gujarat
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Keith Jones | 27 Mar 20:43 2015
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Mirage 2


Hi All,

I'm in the process of upgrading a test instance of DSPACE from 3.2 to 5.1. I have it up and running with Mirage but when I re-compiled to use the Mirage 2 theme the system is up but does not display properly.

Here is the error I'm seeing in the tomcat logs:

Mar 26, 2015 11:39:27 AM org.apache.catalina.core.ApplicationContext log
INFO: Initializing Spring root WebApplicationContext
Mar 26, 2015 11:39:28 AM org.apache.catalina.core.ApplicationContext log
INFO: Apache Cocoon Spring Configurator v1.0.2 is running in mode 'prod'.
Mar 26, 2015 11:39:28 AM org.apache.catalina.core.StandardContext listenerStart
SEVERE: Exception sending context initialized event to listener instance of class org.springframework.web.context.Conte
xtLoaderListener
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dspace.eventService' defined in
 ServletContext resource [/WEB-INF/spring/applicationContext.xml]: Instantiation of bean failed; nested exception is or
g.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.dspace.services.EventService o
rg.dspace.utils.DSpace.getEventService()] threw exception; nested exception is java.lang.IllegalStateException: DSpace 
kernel cannot be null
        at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResol
ver.java:581)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(A
bstractAutowireCapableBeanFactory.java:1015)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAuto
wireCapableBeanFactory.java:911)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCa
pableBeanFactory.java:485)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapa
bleBeanFactory.java:456)
        at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294)
        at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegi
stry.java:225)
        at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291)
        at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193)
        at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListabl
eBeanFactory.java:585)
        at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractAppli
cationContext.java:913)
        at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:464)
        at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:38
5)
        at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:284)
        at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:111)
        at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4791)
        at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5285)
        at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
        at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:901)
        at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:877)
        at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:633)
        at org.apache.catalina.startup.HostConfig.deployDirectory(HostConfig.java:1114)
        at org.apache.catalina.startup.HostConfig$DeployDirectory.run(HostConfig.java:1673)
        at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
        at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
        at java.util.concurrent.FutureTask.run(FutureTask.java:166)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
        at java.lang.Thread.run(Thread.java:722)
Caused by: org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public org.dspace.services.E
ventService org.dspace.utils.DSpace.getEventService()] threw exception; nested exception is java.lang.IllegalStateExcep
tion: DSpace kernel cannot be null
        at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrateg
y.java:169)
        at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResol
ver.java:570)
        ... 28 more
Caused by: java.lang.IllegalStateException: DSpace kernel cannot be null
        at org.dspace.utils.DSpace.getServiceManager(DSpace.java:63)
        at org.dspace.utils.DSpace.getEventService(DSpace.java:75)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:601)
        at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrateg
y.java:149)
        ... 29 more

Mar 26, 2015 11:39:28 AM org.apache.catalina.core.ApplicationContext log
INFO: Closing Spring root WebApplicationContext


I'm able to get data pulls and click on links, but the interface is incomplete, like a CSS style sheet is missing. Any help would be appreciated.

Thanks
Keith
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Courtney Earl Matthews | 27 Mar 20:37 2015
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Picon

enabling html in edit collection: edit metadata: license text area

Hello all,

 

How would I enable html in edit collection: edit metadata: license text area?

 

I’m currently able to do some basic html in the license text area with some exceptions. For example <b></b> renders as html but <strong></strong> displays as plain text.

 

Thanks for your time,

 

Courtney.

 

Courtney Earl Matthews

Digital Repository Librarian

University of Waterloo Library

(519) 888-4567 ext. 30185

courtney.e.matthews-QFUY5ocGksJFJ04o6PK0Fg@public.gmane.org

 

 

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Monika C. Mevenkamp | 27 Mar 17:50 2015
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Fwd: XMLUI unknown protocol error

trying again with smaller attachments 

________________
Monika Mevenkamp
phone: 609-258-4161
Lewis Library,Washington Road and Ivy Lane, Princeton University, Princeton, NJ 08544


Begin forwarded message:

From: "Monika C. Mevenkamp" <monikam <at> exchange.Princeton.EDU>
Subject: XMLUI unknown protocol error
Date: March 27, 2015 at 11:37:01 AM EDT


According to 
git diff remotes/upstream/dspace-5_x -- dspace-xmlui
I have one change in css and added log messages in ShibbolethAction.java

To make sure to start with a clean slate, I stopped tomcat, removed logs files, did 'rm -rf $CATALINA_HOME/work/‘, checked that I can access solr. 

When I bring the UI up under tomcat and go to the homepage, I get an unknown protocol error 
I have attached the full  dspace and cocoon log files. There is nothing in dspace.log. 
The cocoon log complains about the exception below. According to the diff command aspects,map is the same as the corresponding one in the source tree, 

I am thoroughly stumped 

Any tips any body ? 

Monika

2015-03-27 11:28:53,177 ERROR cocoon.handled  - Sitemap: error when calling sub-sitemap




________________ 

Monika Mevenkamp
phone: 609-258-4161
Lewis Library,Washington Road and Ivy Lane, Princeton University, Princeton, NJ 08544



Attachment (dspace.log): application/octet-stream, 8 KiB
Attachment (cocoon.log.tgz): application/octet-stream, 162 KiB
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Monika C. Mevenkamp | 27 Mar 15:32 2015
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Cocoon cache

I remember reading somewhere something about cleaning out the cocoon cache. Can’t find that note anymore 
Can somebody please point me  ?

Thanks 

Monika

________________
Monika Mevenkamp
phone: 609-258-4161
Lewis Library,Washington Road and Ivy Lane, Princeton University, Princeton, NJ 08544


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Tim Ribaric | 27 Mar 15:25 2015
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Re: Viewing bitstreams in submissions only works for admin users - SOLVED

Hello All,

 

I just wanted to provide a follow up on this problem we were facing.  It turns out the culprit was the new PDF cover page feature.  The cover page also created some other bugs; title pages not matching the contents of the PDF, file not found errors, etc. Our best guess was because it kept writing to the same temp file and race conditions and deadlocks were happening. Your mileage may vary of course but as soon as we deactivated it viewing submissions working no problem.


Thanks,
Tim

 

From: Tim Ribaric
Sent: Thursday, March 12, 2015 2:32 PM
To: DSpace Tech(dspace-tech-5NWGOfrQmneRv+LV9MX5uipxlwaOVQ5f@public.gmane.org)
Cc: Michael Tisi
Subject: [Dspace-tech] Viewing bitstreams in submissions only works for admin users

 

Hello All,

 

We recently moved to DSpace 5 and we are noticing some odd behavior with submissions.  It seems like only locally created Admin accounts can view bitstreams of submissions regardless of what permissions non-admin accounts have.  For example:

 

-          A submission comes in to a collection.  That collection has ‘Accept/Reject Edit Metadata’ set to ‘Group A’

-          ‘Group A’ has two members in it:

o   The on the box admin created account (done via /bin/dspace user add) that is the uber admin essentially of the site

o   A second account that was automatically generated from an LDAP login, it has no further admin rights

-          If the second accounts ‘accepts’ the task in that collection and then it can view/edit accept/reject as appropriate but when you click on the PDF submission directly the system just seems to hang, no PDF is presented

-          The admin account  can view/edit accept/reject but when you click on the PDF it loads as expected.

 

Any ideas what might be the cause?  (If it helps we started with a 1.8 box before doing the upgrade, everything else seems to work as expected)

 

Thanks,
Tim

 

 

==================

Tim Ribaric

Acting Head, Library Systems & Technologies

Digital Services Librarian

Computer Science & Philosophy Liaison Librarian

<at> elibtronic

 

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FABIO ROSA | 26 Mar 21:11 2015
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Register new users

I have a problem to register new users. The initial email is not being sent to the new user. Other types of repository emails are sent normally. 

I have to force change your password so that an email is sent to the user. What can be happening?

Version: 4.x and 5x
XMLUI

Tks,
Fabio Rosa

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Webb, Nicholas | 26 Mar 18:16 2015

Examples of custom (XMLUI) interfaces in archives & special collections?

At the institutional archive where I'm the DSpace administrator, we use the stock XMLUI Reference theme
with a few CSS changes to match our institutional brand guidelines. This is fine for our internal needs,
but our instance recently started hosting a scanned collection of WW2 records which has attracted some
public interest, and I've had complaints from patrons who find the interface difficult to use.

I plan to create a custom theme for this collection and do some basic XMLUI tweaking to remove the interface
elements that confuse novice users (multiple search boxes, separate browse menus for the collection and
the entire repository), but I'm curious to see whether any institutions have done more extensive
customization to create a special-collection-centric DSpace instance. I realize that online exhibits
aren't the primary DSpace use case, but I'm interested to know what's possible.

Thanks --

Nicholas Webb
Digital Archivist

Icahn School of Medicine at Mount Sinai
Box 1102 - One Gustave L. Levy Place
New York, NY 10029-6574

(o) 212-241-7239
(f) 212-241-7864
(e) nicholas.webb@... 

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Ruben | 26 Mar 15:08 2015

batch CSV editing with ORCID header in DSpace 5

Hi all,

I'm testing batch CSV editing with ORCID header on DSpace 5.1 and I 
found 2 problems. The first I think I've solved, and is the use of proxy 
to connect outside. By default it's not set, but I've modified java code 
to use it, and seems works well connecting with ORCID. Now I have the 
second problem, and is the response seems not be a well-formatted XML, 
and I've received this error message in logs:

2015-03-26 14:50:20,288 ERROR org.dspace.authority.util.XMLUtils  <at>  Error
org.xml.sax.SAXParseExceptionpublicId: -//W3C//DTD HTML 4.01//EN; 
systemId: http://www.w3.org/TR/html4/strict.dtd; lineNumber: 81; 
columnNumber: 5; The declaration for the entity "ContentType" must end 
with '>'.
at org.apache.xerces.parsers.DOMParser.parse(Unknown Source)
at org.apache.xerces.jaxp.DocumentBuilderImpl.parse(Unknown Source)
at javax.xml.parsers.DocumentBuilder.parse(DocumentBuilder.java:121)
at org.dspace.authority.util.XMLUtils.convertStreamToXML(XMLUtils.java:141)
at org.dspace.authority.rest.RESTConnector.get(RESTConnector.java:56)
at org.dspace.authority.orcid.Orcid.getBio(Orcid.java:52)
at org.dspace.authority.orcid.Orcid.queryAuthorityID(Orcid.java:83)
at 
org.dspace.authority.orcid.OrcidAuthorityValue.newInstance(OrcidAuthorityValue.java:246)
at 
org.dspace.app.bulkedit.MetadataImport.getDcValueFromCSV(MetadataImport.java:868)
at org.dspace.app.bulkedit.MetadataImport.compare(MetadataImport.java:501)
at org.dspace.app.bulkedit.MetadataImport.runImport(MetadataImport.java:169)
at 
org.dspace.app.xmlui.aspect.administrative.FlowMetadataImportUtils.processUploadCSV(FlowMetadataImportUtils.java:153)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at 
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.mozilla.javascript.MemberBox.invoke(MemberBox.java:155)
at org.mozilla.javascript.NativeJavaMethod.call(NativeJavaMethod.java:243)
at org.mozilla.javascript.Interpreter.interpretLoop(Interpreter.java:3237)
at org.mozilla.javascript.Interpreter.interpret(Interpreter.java:2394)
at 
org.mozilla.javascript.InterpretedFunction.call(InterpretedFunction.java:162)
at org.mozilla.javascript.ContextFactory.doTopCall(ContextFactory.java:393)
at org.mozilla.javascript.ScriptRuntime.doTopCall(ScriptRuntime.java:2834)
at 
org.mozilla.javascript.InterpretedFunction.call(InterpretedFunction.java:160)
at org.mozilla.javascript.Context.call(Context.java:538)
at 
org.mozilla.javascript.ScriptableObject.callMethod(ScriptableObject.java:1833)
at 
org.mozilla.javascript.ScriptableObject.callMethod(ScriptableObject.java:1803)

The line in which this error is produced is:

HttpHost proxy = new HttpHost("proxy_id, proxy_port,"http");
HttpClient httpClient = HttpClientBuilder.create().build();
HttpResponse getResponse = httpClient.execute(proxy,httpGet);
result = getResponse.getEntity().getContent();
-> document = XMLUtils.convertStreamToXML(result);

Someone is receiving the same message?

Thanks in advance

-- 
........................................................................

Rubén Boada
Tècnic de Càlcul i Aplicacions
Consorci de Serveis Universitaris de Catalunya (CSUC)

Gran Capità, 2 (Edifici Nexus)•08034 Barcelona
T.93 551 62 13•ruben.boada@...
www.csuc.cat •Twitter  <at> CSUC_info•Facebook•Linkedin
Subscriu-te al butlletí; (www.csuc.cat/butlleti)
........................................................................

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Antony Corfield [awc] | 25 Mar 17:24 2015
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Embargo problems DSpace 4.0

Hi,
I've configured DSpace 4.0 to use simple embargo functionality including submission forms and dspace.cfg below. Although the embargo is lifted on the correct date and seems to be working fine I can't see the dc.rights.embargoreason and dc.rights.embargodate in the full item metadata view or in the database. I can see the date in the policies for the item (attached).

It seems that the reason and date aren't being copied to these metadata fields. Prior to upgrade (from 1.8) this was working and any items that were embargoed prior to upgrade do have these metadata fields in the full item view and in the database.

Any help would be very much appreciated as we really need embargo details in the item metadata.

Thanks,
Antony



#### Embargo Settings ####
# DC metadata field to hold the user-supplied embargo terms
#embargo.field.terms = SCHEMA.ELEMENT.QUALIFIER
#awc
embargo.field.terms = dc.rights.embargoreason

# DC metadata field to hold computed "lift date" of embargo
embargo.field.lift = dc.rights.embargodate

# string in terms field to indicate indefinite embargo
embargo.terms.open = forever

# implementation of embargo setter plugin - replace with local implementation if applicable
plugin.single.org.dspace.embargo.EmbargoSetter = org.dspace.embargo.DefaultEmbargoSetter

# implementation of embargo lifter plugin - - replace with local implementation if applicable
plugin.single.org.dspace.embargo.EmbargoLifter = org.dspace.embargo.DefaultEmbargoLifter



Antony Corfield

Swyddog Cronfa Ddata Monitro Ymchwil / Research Monitoring Database Officer
Ymchwil, Busnes ac Arloesi / Research, Business & Innovation

Prifysgol Aberystwyth / Aberystwyth University
Llyfrgell Hugh Owen / Hugh Owen Library
Campws Penglais / Penglais Campus
Aberystwyth
Ceredigion  SY23 3DZ

Ffôn / Tel: 01970 628724
E-bost / Email: awc-4CLdheC3Iye1Qrn1Bg8BZw@public.gmane.org
www.aber.ac.uk/rbi




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Gmane